Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs111986767 chr9:828606 C/T 1.15E-8 168 22.7 20.07 4.5 KM Plot
UCEC rs112137615 chr13:81505199 ATT/A 9.71E-6 171 22.7 18 20.33 KM Plot
UCEC rs112161779 chr11:56913710 G/GA 3.02E-5 173 21.6 25.18 19.13 KM Plot
UCEC rs112177552 chr5:54377886 C/T 1.79E-11 173 21.07 28.03 18.47 KM Plot
UCEC rs112213443 chr17:45824292 G/T 3.34E-5 172 23.82 21.07 12.2 KM Plot
UCEC rs11231050 chr11:62131660 C/G 6.51E-12 174 22.63 20.72 4.33 KM Plot
UCEC rs11235843 chr11:73373996 A/G 3.05E-7 174 4.33 35.43 21.55 KM Plot
UCEC rs112397157 chr16:30844553 A/G 5.7E-9 169 23.23 17.97 4.5 KM Plot
UCEC rs11242990 chr6:5107943 T/C 3.97E-9 172 22.75 22.63 5.97 KM Plot
UCEC rs1124486 chr16:3725891 C/T 1.55E-11 169 21.6 23.52 2.3 KM Plot
UCEC rs112477969 chr14:73372382 C/T 5.28E-7 173 22.8 21.03 10.33 KM Plot
UCEC rs112506257 chr20:40307984 G/A 5.41E-6 172 22.2 24.32 11.53 KM Plot
UCEC rs112538106 chr4:57269646 A/AAAAG 0.000124 174 33.28 22.57 20.17 KM Plot
UCEC rs112603298 chr14:73551783 G/A 4.47E-7 173 22.57 22.63 10.33 KM Plot
UCEC rs112682202 chr1:52908834 A/T 1.02E-11 173 21.1 31.47 4.33 KM Plot